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Clinical documentation for billing (CDI): what physicians need to record

Clinical documentation improvement applied to Brazilian hospitals: the physician notes that support the claim and how to engage the medical staff.

By Published on 9 min read

What is clinical documentation for billing?

It is the record, made by the care team, that lets the hospital claim prove three things: what was done, why it was needed and who did it. Without that record, an item can be denied even if it was delivered.

The acronym CDI comes from the U.S., where it started as clinical documentation improvement. In 2019, the Association of Clinical Documentation Integrity Specialists (ACDIS) replaced “improvement” with “integrity” and warned that treating CDI only as a revenue tool had led to inappropriate practices [10]. The point holds in Brazil: the goal is a complete and accurate record, not a larger claim.

The payment model is different. In the U.S., CDI relies on diagnosis coding that drives DRG payment. In Brazil, 58.6% of health plans' medical expenses were paid fee-for-service in 2025, versus 13.1% through bundles [9]. In that model, each line on the claim needs support in the medical record. The pillar guide on medical claims auditing shows how that support is checked on both sides.

In this guide, operadora means the health plan (private health insurer regulated in Brazil). The ANS (Agência Nacional de Saúde Suplementar, Brazil's National Supplementary Health Agency) regulates health plans and maintains TISS (the mandatory electronic data exchange standard between hospitals and health plans) and TUSS (its unified terminology of codes).

The medical record is an ethical duty before it is a billing document

The duty to document comes from CFM rules, not from the contract with the health plan. CFM Resolution 1,638/2002 (Resolução CFM nº 1.638/2002, on the medical record) defines the record as a single document of a legal, confidential and scientific nature (art. 1) [1]. Responsibility lies with the attending physician, the other professionals involved, department heads and the medical director (art. 2) [1].

The Code of Medical Ethics (Código de Ética Médica, CFM Resolution 2,217/2018) reinforces the rule [2]:

  • Art. 87: physicians may not fail to keep a legible record for each patient; § 1 requires clinical data in chronological order, with date, time, signature and CRM number.
  • Art. 80: physicians may not issue a medical document without a professional act to justify it, or one that does not reflect the truth.
  • Art. 11: physicians may not issue an illegible report or certificate, or one without the CRM number.

Article 80 sets the limit for any documentation program. Better documentation means describing precisely what happened; documenting to bill for what did not happen is an ethics violation.

Digital records are governed by Law 13,787/2018 (Lei nº 13.787/2018, on digitization of medical records) and CFM Resolution 1,821/2007. For digitization, the law requires a digital certificate issued under the Brazilian public key infrastructure (ICP-Brasil) or another legally accepted standard (art. 2, § 2), gives digitized records the same evidentiary value as the original (art. 5) and sets a minimum retention of 20 years from the last entry (art. 6) [3][4]. Since 08/26/2026, CFM Resolution 2,454/2026 also requires recording the use of artificial intelligence in care in the medical record (art. 4, V) [11].

What do physicians need to record?

Article 5 of CFM Resolution 1,638/2002 lists the items the hospital's Medical Record Review Committee must check [1]. The table links each item to what it supports on the claim and to what is often missing.

RecordWhat the rule requiresWhat it supports on the claimCommon gap
Patient identificationFull name, date of birth with four-digit year, sex, mother's name, place of birth, address (art. 5, I, a) [1]Eligibility and match with the TISS formData that differ from the member card
History, physical exam and hypothesesHistory, exam, tests ordered and results, diagnostic hypotheses, final diagnosis and treatment (art. 5, I, b) [1]Medical necessity for admission and procedure; ICD code on the formComplaint without severity; nonspecific ICD
Daily progress notesDate and time, every procedure and who performed it (art. 5, I, c) [1]Room and board, length of stay, ICU, tests and therapies of the dayNote copied from the previous day; day with no note
OrdersDate, time, signature and CRM (art. 87, § 1) [2]Drugs, supplies and diets billedItem given without an order; expired order
Operative and anesthesia reportsAccount of procedures and who performed them (art. 5, I, c) [1]Procedure code, surgical approach, team and fees, implantsProcedure described differs from the authorized one; incomplete team
Implant justificationClinical justification and labels in the record (CFM Resolution 2,318/2022, arts. 3 and 7) [8]Payment for the implantMissing label; generic justification
Professional identificationLegible handwriting, signature and CRM on paper; electronic signature in the system (art. 5, I, c and d) [1]Validity of every entryStamp without signature; shared login
Discharge summaryPrepared and delivered by the attending physician (art. 87, § 3) [2]Closing the claim, principal and secondary ICD codesGeneric or missing summary

Nursing completes the picture. Medication administration, vital signs and wound care are in the nursing record, governed by Federal Nursing Council (Cofen) Resolutions 736/2024 (nursing process) and 754/2024 (electronic nursing record) [7]. The guide on nursing audit covers that side.

Which denials come from poor documentation?

Table 38 of TUSS lists the messages health plans use to justify a denial. A search of the ANS database on 10/17/2026 shows several tied to documentation [5]:

GroupCodes and descriptions (TUSS 38)Record that prevents it
Progress notes2511 no progress note in the medical record for serial treatment (effective 12/01/2025); 2512 physical therapy sessions inconsistent with progress notesComplete daily progress notes
Signature3170 missing signature/stamp of the ordering professional (12/01/2025); 3168 invalid or missing digital signature (10/01/2022)Professional identification
Report3155 partograph or medical report not available to the health plan (05/01/2016); 1822 procedure billed without the test result or technical report (12/01/2025)Reports and operative notes
Consistency with the report3212 procedure or item inconsistent with the technical report (12/01/2025)Orders and operative notes aligned with the claim
Justification3217 missing or insufficient justification (12/01/2025)Explicit medical necessity
Length of stay1903 stay inconsistent with clinical progressProgress notes that describe severity
ICD1509 invalid ICD codeConsistent diagnosis and ICD code

The TISS form reports the diagnosis using the ICD (International Classification of Diseases; CID in Portuguese). The standard's Organizational Component bars health plans from requiring the ICD code on claim forms, as a result of a court decision (item 28) [12]. The guide on TISS denial codes explains how to read these messages in the payment report.

How does a clinical documentation program work in the hospital?

It works as a review of the medical record during the stay, with queries to the physician before discharge. The flow below is a practical adaptation; no Brazilian rule defines a CDI program.

Clinical documentation: physicians amend their own notes before billingFive-step flow of a clinical documentation integrity (CDI) program in a Brazilian hospital: 1. Documentation: physicians and nurses record care in the medical record. 2. Concurrent review: a reviewer reads the record during the stay (progress notes, orders, justifications, ICD code). 3. Physician query, written and open-ended, never suggesting a diagnosis. 4. Amendment by the author: only the physician adds to the note, with a new date and time, without deleting the original. 5. Claim and pre-submission audit. Denials received feed back into physician education. Basis: CFM Resolution 1,638/2002, arts. 3-5; Brazilian Code of Medical Ethics, arts. 80 and 87. Practical adaptation; no Brazilian rule defines a CDI program. Clinical documentation: physicians amend their own notes before billing Flow of a clinical documentation (CDI) program during the hospital stay 1. Documentation Physicians and nurses record care 2. Concurrent review Progress notes, orders, justifications, ICD 3. Physician query Written, open-ended, no leading diagnosis 4. Amendment by author Only the physician adds, with new date and time 5. Claim and audit Claim built from the record, checked before submission Denials received feed back i nto physician education Source: CFM Res. 1,638/2002 (arts. 3-5) and Code of Medical Ethics (arts. 80, 87). Practical adaptation.
Source: Federal Council of Medicine (CFM) — Resolution 1,638/2002 (arts. 3–5) and Brazilian Code of Medical Ethics (CFM Resolution 2,217/2018, arts. 80 and 87). Practical adaptation: no Brazilian rule defines a CDI program. Produced by Accrua.
  1. Documentation. Physicians and nurses record care in the medical record.
  2. Concurrent review. A reviewer (a nurse or physician from internal audit) reads the record during the stay, focusing on progress notes, orders, justifications and ICD codes. The guide on prospective, concurrent and retrospective audit explains this approach.
  3. Physician query. When information is missing, the reviewer asks in writing, with an open question (“what was the indication for changing the antibiotic?”), without suggesting a diagnosis or treatment.
  4. Amendment by the author. Only the physician adds to his or her own note, with a new date and time, without deleting the original.
  5. Claim and feedback. Billing builds the claim from the record; internal audit checks it before submission; denials feed back into physician education.

Step 4 is the sensitive one. The Medical Record Review Committee, mandatory and led by a physician (arts. 3 and 4 of Resolution 1,638/2002), is the natural forum to approve the program's rules [1]. When the health plan audits, CFM Resolution 2,448/2025 provides for on-site access to the record, without removing or copying it (art. 10, II) [6]; the guide on physician audit covers which articles are suspended by court order.

Engaging physicians starts with showing them their own problem

Physicians document better when they see what gaps cost the patient, themselves and the hospital. Practices that tend to work:

  • Speak the clinical language. Show that incomplete notes harm continuity of care and the physician's defense, not just revenue.
  • Give individual feedback. A monthly report by physician or team with documentation-related denials, in value and number of claims.
  • Reduce workload. Templates for progress and operative notes with required fields in the system, without prefilled text that invites copy-paste.
  • Link fees and documentation. The operative note defines team, approach and level of participation; the guide on physician fees on the hospital claim shows the effect on the physician's own payment.
  • Involve the medical director. Responsibility for the record extends to that role (arts. 2 and 5, II, of Resolution 1,638/2002) [1].

What we see in operations

At Accrua, clinical documentation is read while the patient is still in the hospital, because that is when the physician can still complete the record. Accrua OS reads progress notes, prescriptions, operative reports and other reports and checks whether they support what goes on the claim: a procedure consistent with the ICD code, the requesting physician's signature, justification for the length of stay, the OPME label.

When a record is missing, the query reaches the physician with the claim item and the health plan's rule alongside it, not as a generic request for review. That shows the problem that matters to them: a procedure they performed that may not be paid. The clinical decision and the record remain the physician's.

In our managed operation, auditors with nursing backgrounds track open queries by unit and by claim type. Every query and every change is logged in an audit trail, and what we learn from one appeal goes back into the next claim.

Where to start

  1. Map documentation-related denials over the last 6 months, grouped by the TUSS table 38 messages above.
  2. Activate the Medical Record Review Committee as the program's forum, with a monthly agenda on documentation denials.
  3. Define required fields for progress notes, orders and operative notes in the electronic record.
  4. Start concurrent review with surgical and ICU stays, where implants, room and board and fees concentrate.
  5. Publish monthly feedback by medical team, with real anonymized cases.

FAQ on clinical documentation for billing

What does CDI mean in Brazil?

It stands for clinical documentation improvement, now called clinical documentation integrity by ACDIS. In Brazilian hospitals, it refers to reviewing physician notes so they accurately reflect care; there is no specific Brazilian regulation for it.

Which documents must physicians sign for the claim to be paid?

Progress notes, orders, operative notes, test reports and the discharge summary, always with date, time, signature and CRM number. TUSS has specific denial messages for missing signatures of the ordering physician and of the physician responsible for a test.

Can the hospital ask a physician to add to the record later?

The addition is made by the physician, with a new date and time, without deleting the original entry. Under the Code of Medical Ethics, a medical document must reflect the truth (art. 80).

Are electronic records valid for the health plan?

Law 13,787/2018 gives records digitized under its rules the same evidentiary value as the original (art. 5), and CFM Resolution 1,821/2007 regulates electronic record systems. An invalid or missing digital signature has its own TUSS denial message (code 3168).

How long must the hospital keep medical records?

At least 20 years from the last entry, under Law 13,787/2018, art. 6, on paper or in digital form.

Sources

  1. CFM — Resolução nº 1.638, de 10 de julho de 2002 (Resolution 1,638 of July 10, 2002, on the medical record and the Medical Record Review Committee), arts. 1–6.
  2. CFM — Resolução nº 2.217/2018, Código de Ética Médica (Code of Medical Ethics), arts. 11, 80 and 87.
  3. Presidency of Brazil — Lei nº 13.787, de 27 de dezembro de 2018 (Law 13,787 on digitization and retention of medical records), arts. 2, 5 and 6.
  4. CFM — Resolução nº 1.821/2007 (digitization and electronic medical record systems), amended by Resolution 2,218/2018.
  5. ANS — Terminologia Unificada da Saúde Suplementar (TUSS), table 38 (messages), version 202607, official ANS “Demais terminologias” spreadsheet, checked on 10/18/2026.
  6. CFM — Resolução nº 2.448/2025 (medical audit), art. 10.
  7. Cofen — Resoluções nº 736/2024 (nursing process) link and nº 754/2024 (electronic records and digital platforms in nursing)
  8. CFM — Resolução nº 2.318/2022 (implants and medical devices), arts. 3 and 7.
  9. Anahp — Balanço Observatório Anahp, 9ª edição (Anahp Observatory Report, 9th edition), March 2026 (2025 data); payment model based on ANS data processed by Arquitetos da Saúde.
  10. ACDIS — “ACDIS update: From ‘improvement’ to ‘integrity’”, CDI Strategies, v. 13, no. 45, 09/26/2019 (context only).
  11. CFM — Resolução nº 2.454/2026 (artificial intelligence in medicine), art. 4, V.
  12. ANS — Padrão TISS, Componente Organizacional 202609 (TISS Standard, Organizational Component), item 28.